IL_7JQC_083

3D structure

PDB id

7JQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUCCAGG*CCAGGAA

Length

14 nucleotides

Bulged bases

7JQC|1|i|C|6157, 7JQC|1|i|A|6158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQC|1|i|U|6124
7JQC|1|i|U|6125
7JQC|1|i|C|6126
7JQC|1|i|C|6127
7JQC|1|i|A|6128
7JQC|1|i|G|6129
7JQC|1|i|G|6130
*
7JQC|1|i|C|6156
7JQC|1|i|C|6157
7JQC|1|i|A|6158
7JQC|1|i|G|6159
7JQC|1|i|G|6160
7JQC|1|i|A|6161
7JQC|1|i|A|6162

Current chains

Chain i

Cricket paralysis virus IRES RNA

Nearby chains