IL_7JSS_040

3D structure

PDB id

7JSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCCAGACAG*UCGAGU

Length

16 nucleotides

Bulged bases

7JSS|1|1|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSS|1|1|G|1042
7JSS|1|1|C|1043
7JSS|1|1|C|1044
7JSS|1|1|C|1045
7JSS|1|1|A|1046
7JSS|1|1|G|1047
7JSS|1|1|A|1048
7JSS|1|1|C|1049
7JSS|1|1|A|1050
7JSS|1|1|G|1051
*
7JSS|1|1|U|1108
7JSS|1|1|C|1109
7JSS|1|1|G|1110
7JSS|1|1|A|1111
7JSS|1|1|G|1112
7JSS|1|1|U|1113

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L6