IL_7JSS_073
3D structure
- PDB id
- 7JSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSS_073 not in the Motif Atlas
- Geometric match to IL_4WF9_076
- Geometric discrepancy: 0.1015
- The information below is about IL_4WF9_076
- Detailed Annotation
- Bulged stacked bases
- Broad Annotation
- No text annotation
- Motif group
- IL_22551.3
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 10
Unit IDs
7JSS|1|1|G|1933
7JSS|1|1|C|1934
*
7JSS|1|1|G|1964
7JSS|1|1|C|1965
7JSS|1|1|A|1966
7JSS|1|1|C|1967
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
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