IL_7JSS_082

3D structure

PDB id

7JSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

7JSS|1|1|G|2112, 7JSS|1|1|U|2118, 7JSS|1|1|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSS|1|1|U|2105
7JSS|1|1|U|2106
7JSS|1|1|G|2107
7JSS|1|1|A|2108
7JSS|1|1|U|2109
7JSS|1|1|G|2110
7JSS|1|1|U|2111
7JSS|1|1|G|2112
7JSS|1|1|U|2113
7JSS|1|1|A|2114
7JSS|1|1|G|2115
7JSS|1|1|G|2116
7JSS|1|1|A|2117
7JSS|1|1|U|2118
7JSS|1|1|A|2119
7JSS|1|1|G|2120
7JSS|1|1|G|2121
*
7JSS|1|1|C|2177
7JSS|1|1|C|2178
7JSS|1|1|C|2179
7JSS|1|1|U|2180
7JSS|1|1|U|2181
7JSS|1|1|U|2182
7JSS|1|1|A|2183
7JSS|1|1|A|2184

Current chains

Chain 1

23S ribosomal RNA

Nearby chains