IL_7JSS_140
3D structure
- PDB id
- 7JSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GU*AUAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSS_140 not in the Motif Atlas
- Homologous match to IL_4LFB_025
- Geometric discrepancy: 0.1764
- The information below is about IL_4LFB_025
- Detailed Annotation
- Major groove minor groove platform; mini C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_68140.4
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7JSS|1|3|G|597
7JSS|1|3|U|598
*
7JSS|1|3|A|640
7JSS|1|3|U|641
7JSS|1|3|A|642
7JSS|1|3|C|643
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain M
- 30S ribosomal protein S8
- Chain V
- 30S ribosomal protein S17
Coloring options: