IL_7JSS_155

3D structure

PDB id

7JSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

7JSS|1|3|U|1025, 7JSS|1|3|U|1030, 7JSS|1|3|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSS|1|3|G|1003
7JSS|1|3|A|1004
7JSS|1|3|A|1005
7JSS|1|3|G|1006
*
7JSS|1|3|U|1023
7JSS|1|3|G|1024
7JSS|1|3|U|1025
7JSS|1|3|G|1026
7JSS|1|3|C|1027
7JSS|1|3|C|1028
7JSS|1|3|U|1029
7JSS|1|3|U|1030
7JSS|1|3|C|1031
7JSS|1|3|G|1032
7JSS|1|3|G|1033
7JSS|1|3|G|1034
7JSS|1|3|A|1035
7JSS|1|3|A|1036
7JSS|1|3|C|1037

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain S

30S ribosomal protein S14