IL_7JSS_159
3D structure
- PDB id
- 7JSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 7JSS|1|3|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSS_159 not in the Motif Atlas
- Homologous match to IL_4LFB_046
- Geometric discrepancy: 0.1854
- The information below is about IL_4LFB_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
7JSS|1|3|U|1060
7JSS|1|3|G|1061
*
7JSS|1|3|C|1195
7JSS|1|3|A|1196
7JSS|1|3|A|1197
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
- Chain H
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S5
- Chain O
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14
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