IL_7JSZ_039

3D structure

PDB id

7JSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

7JSZ|1|1|A|1046

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSZ|1|1|C|1043
7JSZ|1|1|C|1044
7JSZ|1|1|C|1045
7JSZ|1|1|A|1046
7JSZ|1|1|G|1047
7JSZ|1|1|A|1048
7JSZ|1|1|C|1049
7JSZ|1|1|A|1050
7JSZ|1|1|G|1051
7JSZ|1|1|C|1052
*
7JSZ|1|1|G|1107
7JSZ|1|1|U|1108
7JSZ|1|1|C|1109
7JSZ|1|1|G|1110
7JSZ|1|1|A|1111
7JSZ|1|1|G|1112

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L6

Chain h

50S ribosomal protein L10