IL_7JSZ_082

3D structure

PDB id

7JSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

7JSZ|1|1|U|2111, 7JSZ|1|1|G|2112, 7JSZ|1|1|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSZ|1|1|U|2105
7JSZ|1|1|U|2106
7JSZ|1|1|G|2107
7JSZ|1|1|A|2108
7JSZ|1|1|U|2109
7JSZ|1|1|G|2110
7JSZ|1|1|U|2111
7JSZ|1|1|G|2112
7JSZ|1|1|U|2113
7JSZ|1|1|A|2114
7JSZ|1|1|G|2115
7JSZ|1|1|G|2116
7JSZ|1|1|A|2117
7JSZ|1|1|U|2118
7JSZ|1|1|A|2119
7JSZ|1|1|G|2120
7JSZ|1|1|G|2121
*
7JSZ|1|1|C|2177
7JSZ|1|1|C|2178
7JSZ|1|1|C|2179
7JSZ|1|1|U|2180
7JSZ|1|1|U|2181
7JSZ|1|1|U|2182
7JSZ|1|1|A|2183
7JSZ|1|1|A|2184

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L1