IL_7JSZ_139
3D structure
- PDB id
- 7JSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGCAG*UCAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSZ_139 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.1597
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7JSZ|1|3|C|580
7JSZ|1|3|G|581
7JSZ|1|3|C|582
7JSZ|1|3|A|583
7JSZ|1|3|G|584
*
7JSZ|1|3|U|757
7JSZ|1|3|C|758
7JSZ|1|3|A|759
7JSZ|1|3|G|760
7JSZ|1|3|G|761
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain M
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S12
- Chain T
- 30S ribosomal protein S15
- Chain V
- 30S ribosomal protein S17
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