IL_7JSZ_152

3D structure

PDB id

7JSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

7JSZ|1|3|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7JSZ_152 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.1737

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

7JSZ|1|3|G|925
7JSZ|1|3|G|926
7JSZ|1|3|G|927
*
7JSZ|1|3|U|1390
7JSZ|1|3|U|1391

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 4

mRNA