IL_7JT1_185

3D structure

PDB id

7JT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUGAUGUGUAGGAUAGGUGG*CCACCCUUUAA

Length

31 nucleotides

Bulged bases

7JT1|1|1|U|2111, 7JT1|1|1|G|2115, 7JT1|1|1|U|2118, 7JT1|1|1|U|2122, 7JT1|1|1|C|2175, 7JT1|1|1|C|2179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JT1|1|1|U|2105
7JT1|1|1|U|2106
7JT1|1|1|G|2107
7JT1|1|1|A|2108
7JT1|1|1|U|2109
7JT1|1|1|G|2110
7JT1|1|1|U|2111
7JT1|1|1|G|2112
7JT1|1|1|U|2113
7JT1|1|1|A|2114
7JT1|1|1|G|2115
7JT1|1|1|G|2116
7JT1|1|1|A|2117
7JT1|1|1|U|2118
7JT1|1|1|A|2119
7JT1|1|1|G|2120
7JT1|1|1|G|2121
7JT1|1|1|U|2122
7JT1|1|1|G|2123
7JT1|1|1|G|2124
*
7JT1|1|1|C|2174
7JT1|1|1|C|2175
7JT1|1|1|A|2176
7JT1|1|1|C|2177
7JT1|1|1|C|2178
7JT1|1|1|C|2179
7JT1|1|1|U|2180
7JT1|1|1|U|2181
7JT1|1|1|U|2182
7JT1|1|1|A|2183
7JT1|1|1|A|2184

Current chains

Chain 1

23S ribosomal RNA

Nearby chains