IL_7JT2_082

3D structure

PDB id

7JT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB bound in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

7JT2|1|1|G|2112, 7JT2|1|1|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JT2|1|1|U|2105
7JT2|1|1|U|2106
7JT2|1|1|G|2107
7JT2|1|1|A|2108
7JT2|1|1|U|2109
7JT2|1|1|G|2110
7JT2|1|1|U|2111
7JT2|1|1|G|2112
7JT2|1|1|U|2113
7JT2|1|1|A|2114
7JT2|1|1|G|2115
7JT2|1|1|G|2116
7JT2|1|1|A|2117
7JT2|1|1|U|2118
7JT2|1|1|A|2119
7JT2|1|1|G|2120
7JT2|1|1|G|2121
*
7JT2|1|1|C|2177
7JT2|1|1|C|2178
7JT2|1|1|C|2179
7JT2|1|1|U|2180
7JT2|1|1|U|2181
7JT2|1|1|U|2182
7JT2|1|1|A|2183
7JT2|1|1|A|2184

Current chains

Chain 1

23S ribosomal RNA

Nearby chains