IL_7JT2_166

3D structure

PDB id

7JT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB bound in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

7JT2|1|3|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JT2|1|3|A|1246
7JT2|1|3|U|1247
7JT2|1|3|A|1248
7JT2|1|3|C|1249
7JT2|1|3|A|1250
7JT2|1|3|A|1251
7JT2|1|3|A|1252
7JT2|1|3|G|1253
*
7JT2|1|3|C|1284
7JT2|1|3|A|1285
7JT2|1|3|U|1286
7JT2|1|3|A|1287
7JT2|1|3|A|1288
7JT2|1|3|A|1289
7JT2|1|3|G|1290
7JT2|1|3|U|1291

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14