3D structure

PDB id
7K00 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome at 2 Angstrom Resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
1.98 Å

Loop

Sequence
UAAC*GA
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7K00_007 not in the Motif Atlas
Homologous match to IL_5J7L_007
Geometric discrepancy: 0.1864
The information below is about IL_5J7L_007
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_15052.4
Basepair signature
cWW-L-cWW-L
Number of instances in this motif group
8

Unit IDs

7K00|1|A|U|70
7K00|1|A|A|71
7K00|1|A|A|72
7K00|1|A|C|73
*
7K00|1|A|G|97
7K00|1|A|A|98

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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