IL_7K00_072

3D structure

PDB id

7K00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

1.98 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K00_072 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.1416

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7K00|1|a|C|269
7K00|1|a|A|270
7K00|1|a|G|271
*
7K00|1|a|C|366
7K00|1|a|G|367
7K00|1|a|A|368
7K00|1|a|U|369
7K00|1|a|G|370

Current chains

Chain a

23S rRNA

Nearby chains