3D structure

PDB id
7K00 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome at 2 Angstrom Resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
1.98 Å

Loop

Sequence
CUGAAG*CGUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7K00_165 not in the Motif Atlas
Geometric match to IL_5J7L_351
Geometric discrepancy: 0.075
The information below is about IL_5J7L_351
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_29471.1
Basepair signature
cWW-cWW-L-tHS-L-cWW
Number of instances in this motif group
1

Unit IDs

7K00|1|a|C|2806
7K00|1|a|U|2807
7K00|1|a|G|2808
7K00|1|a|A|2809
7K00|1|a|A|2810
7K00|1|a|G|2811
*
7K00|1|a|C|2889
7K00|1|a|G|2890
7K00|1|a|U|2891
7K00|1|a|G|2892

Current chains

Chain a
23S rRNA

Nearby chains

Chain d
50S ribosomal protein L3
Chain z
50S ribosomal protein L32

Coloring options:


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