IL_7K51_052

3D structure

PDB id

7K51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

7K51|1|1|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K51_052 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.1673

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7K51|1|1|C|1417
7K51|1|1|G|1418
7K51|1|1|A|1419
7K51|1|1|A|1420
7K51|1|1|G|1421
*
7K51|1|1|C|1577
7K51|1|1|U|1578
7K51|1|1|A|1579
7K51|1|1|A|1580
7K51|1|1|G|1581

Current chains

Chain 1

23S ribosomal RNA

Nearby chains