IL_7K52_001
3D structure
- PDB id
- 7K52 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7K52_001 not in the Motif Atlas
- Geometric match to IL_5J7L_245
- Geometric discrepancy: 0.0866
- The information below is about IL_5J7L_245
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7K52|1|1|G|24
7K52|1|1|U|25
7K52|1|1|G|26
7K52|1|1|G|27
7K52|1|1|A|28
7K52|1|1|U|29
7K52|1|1|G|30
*
7K52|1|1|C|510
7K52|1|1|U|511
7K52|1|1|G|512
7K52|1|1|A|513
7K52|1|1|A|514
7K52|1|1|A|515
7K52|1|1|C|516
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain q
- 50S ribosomal protein L20
- Chain s
- 50S ribosomal protein L22
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