3D structure

PDB id
7K52 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UUAAG*UGAUGA
Length
11 nucleotides
Bulged bases
7K52|1|1|U|1523
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7K52_055 not in the Motif Atlas
Geometric match to IL_4V9F_056
Geometric discrepancy: 0.3069
The information below is about IL_4V9F_056
Detailed Annotation
tSH-tHH-tHS
Broad Annotation
No text annotation
Motif group
IL_62654.1
Basepair signature
cWW-tSH-tHH-tHS-cWW
Number of instances in this motif group
1

Unit IDs

7K52|1|1|U|1467
7K52|1|1|U|1468
7K52|1|1|A|1469
7K52|1|1|A|1470
7K52|1|1|G|1471
*
7K52|1|1|U|1520
7K52|1|1|G|1521
7K52|1|1|A|1522
7K52|1|1|U|1523
7K52|1|1|G|1524
7K52|1|1|A|1525

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2522 s
Application loaded.