IL_7K54_162
3D structure
- PDB id
- 7K54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 7K54|1|3|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7K54_162 not in the Motif Atlas
- Geometric match to IL_2D6F_001
- Geometric discrepancy: 0.1929
- The information below is about IL_2D6F_001
- Detailed Annotation
- Self complementary
- Broad Annotation
- Self complementary
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7K54|1|3|C|1059
7K54|1|3|U|1060
7K54|1|3|G|1061
*
7K54|1|3|C|1195
7K54|1|3|A|1196
7K54|1|3|A|1197
7K54|1|3|G|1198
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain H
- 30S ribosomal protein S3
- Chain O
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14
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