IL_7K54_185
3D structure
- PDB id
- 7K54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC
- Length
- 35 nucleotides
- Bulged bases
- 7K54|1|1|U|2132, 7K54|1|1|A|2163, 7K54|1|1|C|2164, 7K54|1|1|A|2171, 7K54|1|1|U|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7K54|1|1|G|2124
7K54|1|1|G|2125
7K54|1|1|A|2126
7K54|1|1|G|2127
7K54|1|1|G|2128
7K54|1|1|C|2129
7K54|1|1|U|2130
7K54|1|1|U|2131
7K54|1|1|U|2132
7K54|1|1|G|2133
7K54|1|1|A|2134
7K54|1|1|A|2135
7K54|1|1|G|2136
7K54|1|1|U|2137
*
7K54|1|1|A|2154
7K54|1|1|U|2155
7K54|1|1|G|2156
7K54|1|1|G|2157
7K54|1|1|A|2158
7K54|1|1|G|2159
7K54|1|1|C|2160
7K54|1|1|C|2161
7K54|1|1|G|2162
7K54|1|1|A|2163
7K54|1|1|C|2164
7K54|1|1|C|2165
7K54|1|1|U|2166
7K54|1|1|U|2167
7K54|1|1|G|2168
7K54|1|1|A|2169
7K54|1|1|A|2170
7K54|1|1|A|2171
7K54|1|1|U|2172
7K54|1|1|A|2173
7K54|1|1|C|2174
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: