3D structure

PDB id
7K55 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GCCUUGAUGUGUAGGAUAGG*CCCUUUAAUGU
Length
31 nucleotides
Bulged bases
7K55|1|1|G|2116, 7K55|1|1|A|2119
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K55|1|1|G|2102
7K55|1|1|C|2103
7K55|1|1|C|2104
7K55|1|1|U|2105
7K55|1|1|U|2106
7K55|1|1|G|2107
7K55|1|1|A|2108
7K55|1|1|U|2109
7K55|1|1|G|2110
7K55|1|1|U|2111
7K55|1|1|G|2112
7K55|1|1|U|2113
7K55|1|1|A|2114
7K55|1|1|G|2115
7K55|1|1|G|2116
7K55|1|1|A|2117
7K55|1|1|U|2118
7K55|1|1|A|2119
7K55|1|1|G|2120
7K55|1|1|G|2121
*
7K55|1|1|C|2177
7K55|1|1|C|2178
7K55|1|1|C|2179
7K55|1|1|U|2180
7K55|1|1|U|2181
7K55|1|1|U|2182
7K55|1|1|A|2183
7K55|1|1|A|2184
7K55|1|1|U|2185
7K55|1|1|G|2186
7K55|1|1|U|2187

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 6
Transfer RNA; tRNA
Chain a
50S ribosomal protein L1

Coloring options:

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