IL_7K55_086

3D structure

PDB id

7K55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

7K55|1|1|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K55_086 not in the Motif Atlas

Geometric match to IL_8C3A_056

Geometric discrepancy: 0.3747

The information below is about IL_8C3A_056

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7K55|1|1|U|2401
7K55|1|1|U|2402
7K55|1|1|C|2403
*
7K55|1|1|G|2414
7K55|1|1|G|2415

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L33

Chain E

50S ribosomal protein L35

Chain l

50S ribosomal protein L15