IL_7K55_128

3D structure

PDB id

7K55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUG*CA

Length

5 nucleotides

Bulged bases

7K55|1|3|U|368

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K55_128 not in the Motif Atlas

Geometric match to IL_4WF9_038

Geometric discrepancy: 0.3758

The information below is about IL_4WF9_038

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7K55|1|3|U|367
7K55|1|3|U|368
7K55|1|3|G|369
*
7K55|1|3|C|392
7K55|1|3|A|393

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 8

Elongation factor G

Chain U

30S ribosomal protein S16