IL_7K55_171
3D structure
- PDB id
- 7K55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 7K55|1|3|A|1492, 7K55|1|3|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7K55_171 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.2948
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
7K55|1|3|C|1407
7K55|1|3|A|1408
7K55|1|3|C|1409
*
7K55|1|3|G|1491
7K55|1|3|A|1492
7K55|1|3|A|1493
7K55|1|3|G|1494
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 8
- Elongation factor G
- Chain Q
- 30S ribosomal protein S12
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