IL_7K55_186

3D structure

PDB id

7K55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGC*GCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K55_186 not in the Motif Atlas

Homologous match to IL_5E81_375

Geometric discrepancy: 0.4902

The information below is about IL_5E81_375

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7K55|1|6|A|11
7K55|1|6|G|12
7K55|1|6|C|13
*
7K55|1|6|G|22
7K55|1|6|C|23
7K55|1|6|U|24

Current chains

Chain 6

tRNAfMet

Nearby chains

Chain 3

Small subunit ribosomal RNA; SSU rRNA