IL_7K9E_002

3D structure

PDB id

7K9E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form II)

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

UUU*AG

Length

5 nucleotides

Bulged bases

7K9E|1|D|U|498

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K9E_002 not in the Motif Atlas

Geometric match to IL_7KKV_001

Geometric discrepancy: 0.1811

The information below is about IL_7KKV_001

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

7K9E|1|D|U|497
7K9E|1|D|U|498
7K9E|1|D|U|499
*
7K9E|1|D|A|506
7K9E|1|D|G|507

Current chains

Chain D

OLE* RNA

Nearby chains

Chain C

OLE-associated protein B