IL_7KGB_131

3D structure

PDB id

7KGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*UGUCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7KGB_131 not in the Motif Atlas

Homologous match to IL_4LFB_013

Geometric discrepancy: 0.2065

The information below is about IL_4LFB_013

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

11

Unit IDs

7KGB|1|a|G|291
7KGB|1|a|G|292
*
7KGB|1|a|U|303
7KGB|1|a|G|304
7KGB|1|a|U|305
7KGB|1|a|C|306
7KGB|1|a|C|307

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16