IL_7KGB_146
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAAAUC*GCGUG
- Length
- 12 nucleotides
- Bulged bases
- 7KGB|1|a|U|623
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_146 not in the Motif Atlas
- Geometric match to IL_8C3A_433
- Geometric discrepancy: 0.2696
- The information below is about IL_8C3A_433
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83023.1
- Basepair signature
- cWW-R-L-R-L-R-L-L-L-L
- Number of instances in this motif group
- 1
Unit IDs
7KGB|1|a|U|596
7KGB|1|a|G|597
7KGB|1|a|A|598
7KGB|1|a|A|599
7KGB|1|a|A|600
7KGB|1|a|U|601
7KGB|1|a|C|602
*
7KGB|1|a|G|620
7KGB|1|a|C|621
7KGB|1|a|G|622
7KGB|1|a|U|623
7KGB|1|a|G|624
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain h
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S16
- Chain q
- 30S ribosomal protein S17
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