IL_7KGB_190
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7KGB_190 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.0568
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.2
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
7KGB|1|A|G|1901
7KGB|1|A|G|1902
7KGB|1|A|A|1903
7KGB|1|A|A|1904
7KGB|1|A|C|1905
7KGB|1|A|U|1906
7KGB|1|A|C|1907
7KGB|1|A|G|1908
7KGB|1|A|G|1909
*
7KGB|1|A|C|2228
7KGB|1|A|U|2229
7KGB|1|A|G|2230
7KGB|1|A|U|2231
7KGB|1|A|C|2232
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
Coloring options: