IL_7L08_030

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UG*UUAA

Length

6 nucleotides

Bulged bases

7L08|1|A|A|2564

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_030 not in the Motif Atlas

Homologous match to IL_7A0S_067

Geometric discrepancy: 0.2866

The information below is about IL_7A0S_067

Detailed Annotation

Major groove intercalation

Broad Annotation

Major groove intercalation

Motif group

IL_77710.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

26

Unit IDs

7L08|1|A|U|2552
7L08|1|A|G|2553
*
7L08|1|A|U|2562
7L08|1|A|U|2563
7L08|1|A|A|2564
7L08|1|A|A|2565

Current chains

Chain A

16S RRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial