IL_7L08_073

3D structure

PDB id

7L08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

ACC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7L08_073 not in the Motif Atlas

Geometric match to IL_4LFB_010

Geometric discrepancy: 0.1468

The information below is about IL_4LFB_010

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

7L08|1|AA|A|982
7L08|1|AA|C|983
7L08|1|AA|C|984
*
7L08|1|AA|G|1004
7L08|1|AA|U|1005
7L08|1|AA|U|1006

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AQ

28S ribosomal protein S21, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial