IL_7LH5_044

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

CGC*GGACUGCCCGCGAAAGCGGGAGGAAGGAG

Length

32 nucleotides

Bulged bases

7LH5|1|AA|C|1161, 7LH5|1|AA|C|1163, 7LH5|1|AA|G|1164, 7LH5|1|AA|A|1168, 7LH5|1|AA|G|1174, 7LH5|1|AA|A|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|AA|C|1116
7LH5|1|AA|G|1117
7LH5|1|AA|C|1118
*
7LH5|1|AA|G|1155
7LH5|1|AA|G|1156
7LH5|1|AA|A|1157
7LH5|1|AA|C|1158
7LH5|1|AA|U|1159
7LH5|1|AA|G|1160
7LH5|1|AA|C|1161
7LH5|1|AA|C|1162
7LH5|1|AA|C|1163
7LH5|1|AA|G|1164
7LH5|1|AA|C|1165
7LH5|1|AA|G|1166
7LH5|1|AA|A|1168
7LH5|1|AA|A|1169
7LH5|1|AA|A|1170
7LH5|1|AA|G|1171
7LH5|1|AA|C|1172
7LH5|1|AA|G|1173
7LH5|1|AA|G|1174
7LH5|1|AA|G|1175
7LH5|1|AA|A|1176
7LH5|1|AA|G|1177
7LH5|1|AA|G|1178
7LH5|1|AA|A|1179
7LH5|1|AA|A|1180
7LH5|1|AA|G|1181
7LH5|1|AA|G|1182
7LH5|1|AA|A|1183
7LH5|1|AA|G|1184

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14 type Z