IL_7LH5_065
3D structure
- PDB id
- 7LH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.27 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LH5_065 not in the Motif Atlas
- Homologous match to IL_7RQB_006
- Geometric discrepancy: 0.0595
- The information below is about IL_7RQB_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7LH5|1|BA|G|188
7LH5|1|BA|G|189
7LH5|1|BA|A|190
7LH5|1|BA|A|191
7LH5|1|BA|C|192
7LH5|1|BA|U|193
7LH5|1|BA|G|194
*
7LH5|1|BA|C|201
7LH5|1|BA|U|202
7LH5|1|BA|C|203
7LH5|1|BA|A|204
7LH5|1|BA|G|205
7LH5|1|BA|U|206
7LH5|1|BA|A|207
7LH5|1|BA|C|208
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 50S ribosomal protein L28
- Chain B7
- 50S ribosomal protein L34
- Chain B8
- 50S ribosomal protein L35
- Chain BP
- 50S ribosomal protein L15
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