IL_7LH5_326

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

CCCUCGGCCGAAU*AUAGGUGAGGG

Length

24 nucleotides

Bulged bases

7LH5|1|BA|G|274, 7LH5|1|BA|G|275, 7LH5|1|BA|C|279, 7LH5|1|BA|C|280, 7LH5|1|BA|A|283, 7LH5|1|BA|U|362, 7LH5|1|BA|A|363|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|BA|C|272|||F
7LH5|1|BA|C|272|||G
7LH5|1|BA|C|272|||H
7LH5|1|BA|U|272|||I
7LH5|1|BA|C|272|||J
7LH5|1|BA|G|274
7LH5|1|BA|G|275
7LH5|1|BA|C|279
7LH5|1|BA|C|280
7LH5|1|BA|G|281
7LH5|1|BA|A|282
7LH5|1|BA|A|283
7LH5|1|BA|U|284
*
7LH5|1|BA|A|357
7LH5|1|BA|U|358
7LH5|1|BA|A|359
7LH5|1|BA|G|360
7LH5|1|BA|G|361
7LH5|1|BA|U|362
7LH5|1|BA|G|363
7LH5|1|BA|A|363|||A
7LH5|1|BA|G|363|||B
7LH5|1|BA|G|363|||C
7LH5|1|BA|G|363|||D

Current chains

Chain BA

23S ribosomal RNA

Nearby chains