IL_7LH5_369

3D structure

PDB id

7LH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

3.27 Å

Loop

Sequence

GUCGCGC*GCGCGGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LH5|1|DA|G|2101
7LH5|1|DA|U|2102
7LH5|1|DA|C|2103
7LH5|1|DA|G|2104
7LH5|1|DA|C|2105
7LH5|1|DA|G|2106
7LH5|1|DA|C|2107
*
7LH5|1|DA|G|2182
7LH5|1|DA|C|2183
7LH5|1|DA|G|2184
7LH5|1|DA|C|2185
7LH5|1|DA|G|2186
7LH5|1|DA|G|2187
7LH5|1|DA|C|2188

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CK

30S ribosomal protein S11

Chain DC

50S ribosomal protein L1