IL_7LS1_026

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAUUCAACC*GCGCACUUCC

Length

19 nucleotides

Bulged bases

7LS1|1|A2|C|692, 7LS1|1|A2|C|694

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|G|465
7LS1|1|A2|A|466
7LS1|1|A2|U|467
7LS1|1|A2|U|468
7LS1|1|A2|C|469
7LS1|1|A2|A|470
7LS1|1|A2|A|471
7LS1|1|A2|C|472
7LS1|1|A2|C|473
*
7LS1|1|A2|G|689
7LS1|1|A2|C|690
7LS1|1|A2|G|691
7LS1|1|A2|C|692
7LS1|1|A2|A|693
7LS1|1|A2|C|694
7LS1|1|A2|U|695
7LS1|1|A2|U|696
7LS1|1|A2|C|697
7LS1|1|A2|C|698

Current chains

Chain A2

28S rRNA

Nearby chains

Chain H2

60S ribosomal protein L6

Chain k2

60S ribosomal protein L28