IL_7LS1_043

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGCC

Length

20 nucleotides

Bulged bases

7LS1|1|A2|G|755, 7LS1|1|A2|C|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|G|752
7LS1|1|A2|A|753
7LS1|1|A2|A|754
7LS1|1|A2|G|755
7LS1|1|A2|G|756
7LS1|1|A2|U|757
7LS1|1|A2|G|758
7LS1|1|A2|G|759
7LS1|1|A2|C|760
*
7LS1|1|A2|G|809
7LS1|1|A2|U|810
7LS1|1|A2|G|811
7LS1|1|A2|U|812
7LS1|1|A2|U|813
7LS1|1|A2|A|814
7LS1|1|A2|C|815
7LS1|1|A2|A|816
7LS1|1|A2|G|817
7LS1|1|A2|C|818
7LS1|1|A2|C|819

Current chains

Chain A2

28S rRNA

Nearby chains

Chain G1

60S ribosomal protein L14

Chain M2

60S ribosomal protein L18a