IL_7LS1_068
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUU*A(PSU)A
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_068 not in the Motif Atlas
- Homologous match to IL_8C3A_037
- Geometric discrepancy: 0.3386
- The information below is about IL_8C3A_037
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7LS1|1|A2|U|1484
7LS1|1|A2|U|1485
7LS1|1|A2|U|1486
*
7LS1|1|A2|A|1495
7LS1|1|A2|PSU|1496
7LS1|1|A2|A|1497
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F1
- 60S ribosomal protein L13
- Chain K2
- 60S ribosomal protein L18
- Chain N2
- 60S ribosomal protein L21
- Chain U2
- 60S ribosomal protein L27a
- Chain V2
- 60S ribosomal protein L29
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