IL_7LS1_114

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAACAAUG*CUAUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|G|2586
7LS1|1|A2|A|2587
7LS1|1|A2|A|2588
7LS1|1|A2|C|2589
7LS1|1|A2|A|2590
7LS1|1|A2|A|2591
7LS1|1|A2|U|2592
7LS1|1|A2|G|2593
*
7LS1|1|A2|C|3506
7LS1|1|A2|U|3507
7LS1|1|A2|A|3508
7LS1|1|A2|U|3509
7LS1|1|A2|C|3510

Current chains

Chain A2

28S rRNA

Nearby chains

Chain E2

60S ribosomal protein L3

Chain J2

60S ribosomal protein L17

Chain X2

60S ribosomal protein L31