IL_7LS1_136

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAGUC*GGUGGG

Length

11 nucleotides

Bulged bases

7LS1|1|A2|G|3835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|U|3583
7LS1|1|A2|A|3584
7LS1|1|A2|G|3585
7LS1|1|A2|U|3586
7LS1|1|A2|C|3587
*
7LS1|1|A2|G|3831
7LS1|1|A2|G|3832
7LS1|1|A2|U|3833
7LS1|1|A2|G|3834
7LS1|1|A2|G|3835
7LS1|1|A2|G|3836

Current chains

Chain A2

28S rRNA

Nearby chains

Chain D2

60S ribosomal protein L8

Chain H1

60S ribosomal protein L15

Chain i2

60S ribosomal protein L36a

Chain n2

Transfer RNA; tRNA