IL_7LS1_148
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 7LS1|1|A2|C|4001
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_148 not in the Motif Atlas
- Geometric match to IL_4LFB_041
- Geometric discrepancy: 0.3822
- The information below is about IL_4LFB_041
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 54
Unit IDs
7LS1|1|A2|G|3999
7LS1|1|A2|A|4000
7LS1|1|A2|C|4001
7LS1|1|A2|C|4002
*
7LS1|1|A2|G|4016
7LS1|1|A2|C|4017
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F1
- 60S ribosomal protein L13
- Chain K2
- 60S ribosomal protein L18
- Chain U2
- 60S ribosomal protein L27a
- Chain i2
- 60S ribosomal protein L36a
Coloring options: