IL_7LS1_182

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAAACG*CUCGCC

Length

12 nucleotides

Bulged bases

7LS1|1|A2|C|4540

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|G|4536
7LS1|1|A2|A|4537
7LS1|1|A2|A|4538
7LS1|1|A2|A|4539
7LS1|1|A2|C|4540
7LS1|1|A2|G|4541
*
7LS1|1|A2|C|4569
7LS1|1|A2|U|4570
7LS1|1|A2|C|4571
7LS1|1|A2|G|4572
7LS1|1|A2|C|4573
7LS1|1|A2|C|4574

Current chains

Chain A2

28S rRNA

Nearby chains

Chain G1

60S ribosomal protein L14

Chain H2

60S ribosomal protein L6

Chain I2

60S ribosomal protein L13a