IL_7LS1_189

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

7LS1|1|A2|C|4659

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|G|4658
7LS1|1|A2|C|4659
7LS1|1|A2|A|4660
7LS1|1|A2|G|4661
7LS1|1|A2|A|4662
7LS1|1|A2|G|4663
*
7LS1|1|A2|C|4678
7LS1|1|A2|G|4679
7LS1|1|A2|A|4680
7LS1|1|A2|U|4681
7LS1|1|A2|C|4682

Current chains

Chain A2

28S rRNA

Nearby chains

Chain L2

60S ribosomal protein L19

Chain O2

60S ribosomal protein L22

Chain Q2

60S ribosomal protein L24

Chain u

40S ribosomal protein S8