IL_7LS1_206

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUGGU(OMU)CCUUU*AUUCGAACG

Length

21 nucleotides

Bulged bases

7LS1|1|m2|G|113

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|U|110
7LS1|1|m2|A|111
7LS1|1|m2|U|112
7LS1|1|m2|G|113
7LS1|1|m2|G|114
7LS1|1|m2|U|115
7LS1|1|m2|OMU|116
7LS1|1|m2|C|117
7LS1|1|m2|C|118
7LS1|1|m2|U|119
7LS1|1|m2|U|120
7LS1|1|m2|U|121
*
7LS1|1|m2|A|345
7LS1|1|m2|U|346
7LS1|1|m2|U|347
7LS1|1|m2|C|348
7LS1|1|m2|G|349
7LS1|1|m2|A|350
7LS1|1|m2|A|351
7LS1|1|m2|C|352
7LS1|1|m2|G|353

Current chains

Chain m2

28S rRNA

Nearby chains

Chain r2

40S ribosomal protein S4, X isoform

Chain u

40S ribosomal protein S8

Chain w2

40S ribosomal protein S11