IL_7LS1_209

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

7LS1|1|m2|G|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|C|218
7LS1|1|m2|A|219
7LS1|1|m2|U|220
7LS1|1|m2|U|221
*
7LS1|1|m2|A|304
7LS1|1|m2|C|305
7LS1|1|m2|C|306
7LS1|1|m2|U|307
7LS1|1|m2|C|308
7LS1|1|m2|G|309
7LS1|1|m2|G|310
7LS1|1|m2|G|311

Current chains

Chain m2

28S rRNA

Nearby chains

Chain r2

40S ribosomal protein S4, X isoform

Chain u

40S ribosomal protein S8