IL_7LS1_224
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS1_224 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.3173
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7LS1|1|m2|G|565
7LS1|1|m2|A|566
7LS1|1|m2|G|567
*
7LS1|1|m2|C|587
7LS1|1|m2|G|588
7LS1|1|m2|A|589
7LS1|1|m2|G|590
7LS1|1|m2|G|591
7LS1|1|m2|A|592
7LS1|1|m2|U|593
7LS1|1|m2|C|594
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain L3
- 40S ribosomal protein S9
- Chain T3
- 40S ribosomal protein S30
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