IL_7LS1_293

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGUAAAGCGAAUG*CAAACUUUAAAU(E7G)

Length

27 nucleotides

Bulged bases

7LS1|1|A2|G|1543

QA status

Modified nucleotides: E7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|C|1534
7LS1|1|A2|G|1535
7LS1|1|A2|G|1536
7LS1|1|A2|U|1537
7LS1|1|A2|A|1538
7LS1|1|A2|A|1539
7LS1|1|A2|A|1540
7LS1|1|A2|G|1541
7LS1|1|A2|C|1542
7LS1|1|A2|G|1543
7LS1|1|A2|A|1544
7LS1|1|A2|A|1545
7LS1|1|A2|U|1546
7LS1|1|A2|G|1547
*
7LS1|1|A2|C|1587
7LS1|1|A2|A|1588
7LS1|1|A2|A|1589
7LS1|1|A2|A|1590
7LS1|1|A2|C|1591
7LS1|1|A2|U|1592
7LS1|1|A2|U|1593
7LS1|1|A2|U|1594
7LS1|1|A2|A|1595
7LS1|1|A2|A|1596
7LS1|1|A2|A|1597
7LS1|1|A2|U|1598
7LS1|1|A2|E7G|1599

Current chains

Chain A2

28S rRNA

Nearby chains

Chain A1

60S ribosomal protein L7

Chain B2

5S ribosomal RNA; 5S rRNA

Chain D1

60S ribosomal protein L10-like

Chain G2

60S ribosomal protein L5

Chain N2

60S ribosomal protein L21