IL_7LS1_295

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUAGACAGC*GCCGAA

Length

16 nucleotides

Bulged bases

7LS1|1|A2|A|1762

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|U|1759
7LS1|1|A2|A|1760
7LS1|1|A2|U|1761
7LS1|1|A2|A|1762
7LS1|1|A2|G|1763
7LS1|1|A2|A|1764
7LS1|1|A2|C|1765
7LS1|1|A2|A|1766
7LS1|1|A2|G|1767
7LS1|1|A2|C|1768
*
7LS1|1|A2|G|1823
7LS1|1|A2|C|1824
7LS1|1|A2|C|1825
7LS1|1|A2|G|1826
7LS1|1|A2|A|1827
7LS1|1|A2|A|1828

Current chains

Chain A2

28S rRNA

Nearby chains

Chain M2

60S ribosomal protein L18a

Chain g2

Ubiquitin-60S ribosomal protein L40

Chain j

60S acidic ribosomal protein P0